This is the code to train the CNN-based detector Detectron2 on ISIIS images.
https://github.com/ThelmaPana/Detectron2_plankton_training
The trained model is then used in apeep to detect planktonic organisms in ISIIS images. This is part of the work on the segmentation of plankton images published in Frontiers in Marine Science: 10.3389/fmars.2022.870005.